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GAPSTOP(TM)

  • Description

    is GPU-Accelerated Python STOPgap for Template Matching for fast template matching (TM) in cryo electron tomograms that is based on TM routines from STOPGAP.

  • Usage

    To list all executables provided by GAPSTOP(TM), run: $ sbgrid-list gapstop_tm Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install gapstoptm Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    W. Wan, S. Khavnekar, and J. Wagner. 2024. STOPGAP: an open-source package for template matching, subtomogram alignment and classification. Acta crystallographica. Section D, Structural biology. 80: 336-349.


    • *Full citation information available through

  • Keywords

    Electron Microscopy, Tomography

  • Default Versions

    Linux 64:  0.4 (5.6 GB)

  • Other Versions

      Linux 64:

      0.3 (5.6 GB)

  • Developers

    Beata Turoňová, Sebastian Kehl

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